Stem-loop ipu-mir-1788

Accession

MI0024523

Description

Ictalurus punctatus ipu-mir-1788 precursor miRNA

Gene family

MIPF0000792; mir-1788

Sequence

GGCUUGUUUUAAGUUGCCUGCGAucucuuaaugacucaggcagcuaaagcaagucug
(((((((((((.((((((((.(.((.......))).)))))))))))))))))))..

Structure

--           A        C A  uc 
  GGCUUGUUUUA GUUGCCUG G uc  u
  ||||||||||| |||||||| | ||  u
  cugaacgaaau cgacggac c ag  a
gu           -        u -  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-1788

• Accession: MIMAT0029433
• Description: Ictalurus punctatus ipu-miR-1788 mature miRNA
• Sequence: 1 - GGCUUGUUUUAAGUUGCCUGCGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174