Stem-loop ipu-mir-196a-2

Accession

MI0024544

Description

Ictalurus punctatus ipu-mir-196a-2 precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

UAGGUAGUUUCAUGUUGUUGGGAuuacauucaaacucugcaacgugaaacugucuuaa
((((((((((((((((((.(((.((......)).))).)))))))))))))).)))).

Structure

-    -              U   A  ac 
 UAGG UAGUUUCAUGUUGU GGG uu  a
 |||| |||||||||||||| ||| ||   
 auuc gucaaagugcaacg cuc aa  u
a    u              u   a  cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-196a

• Accession: MIMAT0029448
• Description: Ictalurus punctatus ipu-miR-196a mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174