Stem-loop ipu-mir-200b

Accession

MI0024555

Description

Ictalurus punctatus ipu-mir-200b precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

caucuuacgaggcagcauuggauuucauuacuuuuucUAAUACUGCCUGGUAAUGAUGAU
((((((((.((((((.((((((.............)))))).)))))).)))).))))..

Structure

--    -    g      c      uuuca 
  cauc uuac aggcag auugga     u
  |||| |||| |||||| ||||||     u
  GUAG AAUG UCCGUC UAAUcu     a
UA    U    G      A      uuuuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-200b

• Accession: MIMAT0029454
• Description: Ictalurus punctatus ipu-miR-200b mature miRNA
• Sequence: 38 - UAAUACUGCCUGGUAAUGAUGAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174