Stem-loop ipu-mir-200c

Accession

MI0024556

Description

Ictalurus punctatus ipu-mir-200c precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

caucuuacaaggcaguuuuggauguuauaucuucucUAAUACUGCCUGGUAAUGAUGC
((((((((.(((((((.(((((............))))).))))))).)))).)))).

Structure

-    -    a       u     uguua 
 cauc uuac aggcagu uugga     u
 |||| |||| ||||||| |||||      
 GUAG AAUG UCCGUCA AAUcu     a
C    U    G       U     cuucu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-200c

• Accession: MIMAT0029455
• Description: Ictalurus punctatus ipu-miR-200c mature miRNA
• Sequence: 37 - UAAUACUGCCUGGUAAUGAUGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174