miRBase entry: ipu-mir-27b

Stem-loop ipu-mir-27b


Accession
MI0024605
Description
Ictalurus punctatus ipu-mir-27b precursor miRNA
Gene family
MIPF0000036; mir-27


Sequence

agagcuuagcugauuggugaacagugauugaacucuuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((.((......)).))))))))))))))))))))))..

Structure
--           g    g       u  uu 
  agagcuuagcu auug ugaacag ga  g
  ||||||||||| |||| ||||||| ||   
  UCUUGAAUCGG UGAC ACUUguu cu  a
CG           -    -       u  ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-27b

Accession MIMAT0029488
Description Ictalurus punctatus ipu-miR-27b mature miRNA
Sequence 40 - UUCACAGUGGCUAAGUUCUGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174