Stem-loop ipu-mir-454b

Accession

MI0024632

Description

Ictalurus punctatus ipu-mir-454b precursor miRNA

Gene family

MIPF0000174; mir-454

Sequence

ccuaucaauauugccucugcuuuucucacuguuuauggagUAGUGCAAUAUUGCUUAUAGGGU
((((((((((((((..(((((((.............))))))).)))))))))...)))))..

Structure

--     ---         cu       ucuca 
  ccuau   caauauugc  cugcuuu     c
  |||||   |||||||||  |||||||     u
  GGAUA   GUUAUAACG  GAUgagg     g
UG     UUC         -U       uauuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-454b

• Accession: MIMAT0029511
• Description: Ictalurus punctatus ipu-miR-454b mature miRNA
• Sequence: 41 - UAGUGCAAUAUUGCUUAUAGGGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174