miRBase entry: ipu-mir-457a

Stem-loop ipu-mir-457a


Accession
MI0024636
Description
Ictalurus punctatus ipu-mir-457a precursor miRNA


Sequence

AAGCAGCACAUCAAUAUUGGCAgcugcccucucucuggguugccaguaugguuugugcug
...(((((((...(((((((((...((((.......)))))))))))))....)))))))

Structure
AAG       -UCA         gcu    uc 
   CAGCACA    AUAUUGGCA   gccc  u
   |||||||    |||||||||   ||||  c
   gucgugu    uaugaccgu   uggg  u
---       uugg         ---    uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-457a

Accession MIMAT0029515
Description Ictalurus punctatus ipu-miR-457a mature miRNA
Sequence 1 - AAGCAGCACAUCAAUAUUGGCA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174