Stem-loop ipu-mir-462

Accession

MI0024640

Description

Ictalurus punctatus ipu-mir-462 precursor miRNA

Gene family

MIPF0001755; mir-462

Literature search

1 open access papers mention ipu-mir-462
(5 sentences)

Sequence

UAACGGAACCCAUAAUGCAGCUGuuugguugauugauugacagcugucuguggauuccgugccc
..((((((.(((((..(((((((((..(((....))).))))))))).))))).))))))....

Structure

--UA      C     AU         ug   g 
    ACGGAA CCAUA  GCAGCUGuu  guu a
    |||||| |||||  |||||||||  |||  
    ugccuu ggugu  ugucgacag  uag u
cccg      a     -c         -u   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-462

• Accession: MIMAT0029519
• Description: Ictalurus punctatus ipu-miR-462 mature miRNA
• Sequence: 1 - UAACGGAACCCAUAAUGCAGCUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174