miRBase entry: ipu-mir-489

Stem-loop ipu-mir-489


Accession
MI0024641
Description
Ictalurus punctatus ipu-mir-489 precursor miRNA
Gene family
MIPF0000111; mir-489


Sequence

uggucguauguaugacgucauuuacuucaaaguuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.((((((((((....)))...))))))).))))))))))))))...

Structure
--u              c       ---   u 
   ggucguauguauga gucauuu   acu c
   |||||||||||||| |||||||   |||  
   UCGGCAUGUAUACU CAGUgag   uga a
UCG              A       guu   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-489

Accession MIMAT0029520
Description Ictalurus punctatus ipu-miR-489 mature miRNA
Sequence 40 - UGACAUCAUAUGUACGGCUGCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174