Stem-loop ipu-mir-9-4

Accession

MI0024657

Description

Ictalurus punctatus ipu-mir-9-4 precursor miRNA

Gene family

MIPF0000014; mir-9

Literature search

1 open access papers mention ipu-mir-9-4
(5 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguuuaugugauaucauaaagcuagagaaccgaaugua
..(((((((.(((((((.(((((..((....))..))))).))))))).)))))))....

Structure

--UC       A       G     gu  a 
    UUUGGUU UCUAGCU UAUGA  uu u
    ||||||| ||||||| |||||  ||  
    aagccaa agaucga auacu  ag g
augu       g       a     au  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-9

• Accession: MIMAT0029528
• Description: Ictalurus punctatus ipu-miR-9 mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174