miRBase entry: ipu-mir-92a-1

Stem-loop ipu-mir-92a-1


Accession
MI0024665
Description
Ictalurus punctatus ipu-mir-92a-1 precursor miRNA
Gene family
MIPF0000013; mir-25


Sequence

agguugggauugguagcaaugcuguguguuuugaaggUAUUGCACUUGUCCCGGCCUGU
((((((((((.(((.((((((((............))))))))))).))))))))))..

Structure
--          u   a        gugug 
  agguugggau ggu gcaaugcu     u
  |||||||||| ||| ||||||||      
  UCCGGCCCUG UCA CGUUAUgg     u
UG          U   -        aaguu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-92a

Accession MIMAT0029529
Description Ictalurus punctatus ipu-miR-92a mature miRNA
Sequence 38 - UAUUGCACUUGUCCCGGCCUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174