miRBase entry: ipu-mir-3618

Stem-loop ipu-mir-3618


Accession
MI0024682
Description
Ictalurus punctatus ipu-mir-3618 precursor miRNA
Gene family
MIPF0001710; mir-3618


Sequence

GAUUUCCAAUAAUUGAGACAGUaauuucuaaaaagcugucuacauuaaugaaaagaac
......((.((((..(((((((............)))))))..)))).))........

Structure
--GAUUUC  A    UG       aauuu 
        CA UAAU  AGACAGU     c
        || ||||  |||||||      
        gu auua  ucugucg     u
caagaaaa  a    ca       aaaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-3618

Accession MIMAT0029546
Description Ictalurus punctatus ipu-miR-3618 mature miRNA
Sequence 1 - GAUUUCCAAUAAUUGAGACAGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174