miRBase entry: ipu-mir-7551

Stem-loop ipu-mir-7551


Accession
MI0024683
Description
Ictalurus punctatus ipu-mir-7551 precursor miRNA


Sequence

ggacggauggcguaaccguagcaaaacuuaugcguuuucaaacuaaaacgcacuaguguaaacGGGGCCUGAGUCCUUCUGG
((((....(((....((((......(((..((((((((......))))))))..)))....)))).)))...))))......

Structure
------    ggau   guaa    agcaaa   ua        ca 
      ggac    ggc    ccgu      acu  ugcguuuu  a
      ||||    |||    ||||      |||  ||||||||   
      CCUG    CCG    GGca      uga  acgcaaaa  a
GGUCUU    -AGU   ---G    --aaug   uc        uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7551

Accession MIMAT0029547
Description Ictalurus punctatus ipu-miR-7551 mature miRNA
Sequence 64 - GGGGCCUGAGUCCUUCUGG - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174