miRBase entry: ipu-mir-7553

Stem-loop ipu-mir-7553


Accession
MI0024685
Description
Ictalurus punctatus ipu-mir-7553 precursor miRNA

Literature search
1 open access papers mention ipu-mir-7553
(2 sentences)

Sequence

UGACGUCAUUAGCGACCCGACCuauuggauagagacacggccaucgcuucugacgccgcu
...(((((..(((((.(((.(((((...)))).)...)))...)))))..))))).....

Structure
--UGA     UU     --C   --A -    u 
     CGUCA  AGCGA   CCG   C Cuau  
     |||||  |||||   |||   | |||| g
     gcagu  ucgcu   ggc   g gaua  
ucgcc     cu     acc   aca a    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7553

Accession MIMAT0029549
Description Ictalurus punctatus ipu-miR-7553 mature miRNA
Sequence 1 - UGACGUCAUUAGCGACCCGACC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174