miRBase entry: ipu-mir-7563b

Stem-loop ipu-mir-7563b


Accession
MI0024697
Description
Ictalurus punctatus ipu-mir-7563b precursor miRNA
Gene family
MIPF0001709; mir-7563


Sequence

ACCGCGUACUUACCUACUGUAUGguagcuaagaugcauguauuucgccuauuauauagcggguaaguacgcgguuu
(((((((((((((((.(((((((((((...(((((....)))))...))))))))))).)))))))))))))))..

Structure
--               A           cua     c 
  ACCGCGUACUUACCU CUGUAUGguag   agaug a
  ||||||||||||||| |||||||||||   |||||  
  uggcgcaugaauggg gauauauuauc   uuuau u
uu               c           cgc     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7563b

Accession MIMAT0029561
Description Ictalurus punctatus ipu-miR-7563b mature miRNA
Sequence 1 - ACCGCGUACUUACCUACUGUAUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174