miRBase entry: ipu-mir-7563c

Stem-loop ipu-mir-7563c


Accession
MI0024698
Description
Ictalurus punctatus ipu-mir-7563c precursor miRNA


Sequence

UUUCAGAGCCAGAGAUCGACAGCcuguuccagaucacauggagaucugugaccucgggcucugacgcg
..((((((((.(((.((.((((....(((((.......)))))..)))))).))).))))))))....

Structure
--UU        A   A  G    Ccug     ga 
    UCAGAGCC GAG UC ACAG    uucca  u
    |||||||| ||| || ||||    |||||  c
    agucucgg cuc ag uguc    gaggu  a
gcgc        g   c  -    --ua     ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-7563c

Accession MIMAT0029562
Description Ictalurus punctatus ipu-miR-7563c mature miRNA
Sequence 1 - UUUCAGAGCCAGAGAUCGACAGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174