Stem-loop cbr-mir-7580-2

Accession

MI0024718

Description

Caenorhabditis briggsae cbr-mir-7580-2 precursor miRNA

Gene family

MIPF0001732; mir-7580

Sequence

agccacuucgguugugguuauacaaacagaaguugauaUAACCCAAUCACGAAAAUGGCUGA
(((((.((((((((.(((((((..(((....)))..)))))))))))..))))..)))))..

Structure

--     -c    --    u       ca   a 
  agcca  uucg  guug gguuaua  aac g
  |||||  ||||  |||| |||||||  |||  
  UCGGU  AAGC  UAAC CCAAUau  uug a
AG     AA    AC    -       ag   a 

Annotation confidence Not enough data

Genome context

chrX: 11141279-11141340 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cbr-mir-7580-2

Mature cbr-miR-7580

• Accession: MIMAT0029581
• Description: Caenorhabditis briggsae cbr-miR-7580 mature miRNA
• Sequence: 39 - UAACCCAAUCACGAAAAUGGCUGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508