miRBase entry: cbr-mir-7583c

Stem-loop cbr-mir-7583c


Accession
MI0024729
Description
Caenorhabditis briggsae cbr-mir-7583c precursor miRNA
Gene family
MIPF0001676; mir-7583


Sequence

AGCUGCAAAAGUCGUGGUGGCaucacaaguugucuugCCAUCCGACAUUUGUGGUUGA
(((((((((.((((.(((((((..(((...)))..))))))))))).)))))))))..

Structure
--         A    U       uc   a 
  AGCUGCAAA GUCG GGUGGCa  aca  
  ||||||||| |||| |||||||  ||| g
  UUGGUGUUU CAGC CUACCgu  ugu  
AG         A    -       uc   u 


Annotation confidence Not enough data
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Genome context
chrX: 10872909-10872966 [+]

Database links

Mature cbr-miR-7583c-5p

Accession MIMAT0029593
Description Caenorhabditis briggsae cbr-miR-7583c-5p mature miRNA
Sequence 1 - AGCUGCAAAAGUCGUGGUGGC - 21
Evidence experimental
Illumina [1]

Mature cbr-miR-7583c-3p

Accession MIMAT0029594
Description Caenorhabditis briggsae cbr-miR-7583c-3p mature miRNA
Sequence 38 - CCAUCCGACAUUUGUGGUUGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508