Stem-loop sequence cbr-mir-785b

Accession

MI0024746 (change log)

Description

Caenorhabditis briggsae miR-785b stem-loop

Stem-loop

   --a    u     uauu   u      c  - a 
5'    gaag uagag    uuc cuuagc aa c c
      |||| |||||    ||| |||||| || | a
3'    cuuc aucuc    aag gaaucg uu g u
   ugg    c     --uu   u      c  a u 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (CB4; GCA_000004555.3): chrX: 4421255-4421318 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from cbr-mir-785b

• cbr-mir-75: chrX: 4419739-4419830 [-]
• cbr-mir-785b: chrX: 4421255-4421318 [+]
• cbr-mir-74a: chrX: 4426602-4426682 [-]
• cbr-mir-74b: chrX: 4426711-4426827 [-]
• cbr-mir-73a: chrX: 4426887-4426980 [-]
• cbr-mir-2231: chrX: 4430575-4430638 [-]

Database links

• miRBase Tracker:MI0024746

Mature sequence cbr-miR-785b

• Accession: MIMAT0029609
• Sequence: 42 - uaagugaauucucuaccuucggu - 64
• Evidence: experimental; Illumina [1]

References

1. PMID:23363624 "High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes" Shi Z, Montgomery TA, Qi Y, Ruvkun G Genome Res. 23:497-508(2013).