miRBase entry: crm-mir-7579

Stem-loop crm-mir-7579


Accession
MI0024747
Description
Caenorhabditis remanei crm-mir-7579 precursor miRNA


Sequence

acggcacucgcaguuuucucaacacucaagacguagcguUGAGGACCUGUAGAGUUCCGUUC
((((.((((((((..((((((((.((........)).)))))))).)))).)))).))))..

Structure
--    c    -    uu        a  caa 
  acgg acuc gcag  uucucaac cu   g
  |||| |||| ||||  |||||||| ||    
  UGCC UGAG UGUC  AGGAGUug ga   a
CU    U    A    -C        c  ugc 


Annotation confidence Not enough data
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Genome context
Crem_Contig0: 2909124-2909185 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from crm-mir-7579
Name Accession Chromosome Start End Strand Confidence




Database links

Mature crm-miR-7579

Accession MIMAT0029610
Description Caenorhabditis remanei crm-miR-7579 mature miRNA
Sequence 40 - UGAGGACCUGUAGAGUUCCGUUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508