miRBase entry: crm-mir-358

Stem-loop crm-mir-358

Accession

MI0024751

Description

Caenorhabditis remanei crm-mir-358 precursor miRNA

Sequence

accuggccaggcauuccaacuguccauccaaguacuuuaucggacaAUUGGUAUCCCUGUCAAGGUCU
(((((((.(((.((.((((.(((((................))))).)))).)).)))))).))))..

Structure

--    -   c   c  u    c     auccaag 
  accu ggc agg au ccaa ugucc       u
  |||| ||| ||| || |||| |||||        
  UGGA CUG UCC UA GGUU acagg       a
UC    A   -   C  U    A     cuauuuc

Annotation confidence Not enough data

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Genome context

Crem_Contig13: 949739-949806 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-358

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-358

Accession	MIMAT0029614
Description	Caenorhabditis remanei crm-miR-358 mature miRNA
Sequence	47 - AUUGGUAUCCCUGUCAAGGUCU - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508