Stem-loop cbn-mir-7579-2

Accession

MI0024790

Description

Caenorhabditis brenneri cbn-mir-7579-2 precursor miRNA

Gene family

MIPF0001830; mir-7579

Sequence

acaggagucaauggagccucaauuaucauuaugaauaauUGAGGACCGUUUUCUAACUGUGA
((((.((..(((((..((((((((((((...)).)))))))))).)))))..))..))))..

Structure

--    -g  uc     ag          -  u 
  acag  ag  aaugg  ccucaauuau ca  
  ||||  ||  |||||  |||||||||| || u
  UGUC  UC  UUGCC  GGAGUuaaua gu  
AG    AA  UU     -A          a  a 

Annotation confidence Not enough data

Genome context

Cbre_Contig570: 16961-17022 [+]

Mature cbn-miR-7579

• Accession: MIMAT0029650
• Description: Caenorhabditis brenneri cbn-miR-7579 mature miRNA
• Sequence: 40 - UGAGGACCGUUUUCUAACUGUGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508