Stem-loop cbn-mir-1822-1

Accession

MI0024791

Description

Caenorhabditis brenneri cbn-mir-1822-1 precursor miRNA

Gene family

MIPF0001009; mir-1822

Sequence

aguuuauccaggaaagcuaucggacugacguuugguaccGAGCUGCCCUGGGAUAGACUCU
((((((((((((..(((..(((((((((...))))).)))))))..))).)))))))))..

Structure

--         -   aa   ua    -     c 
  aguuuaucc agg  agc  ucgg acuga  
  ||||||||| |||  |||  |||| ||||| g
  UCAGAUAGG UCC  UCG  AGcc ugguu  
UC         G   CG   --    a     u 

Annotation confidence Not enough data

Genome context

Cbre_Contig376: 51585-51645 [-]

Mature cbn-miR-1822

• Accession: MIMAT0029651
• Description: Caenorhabditis brenneri cbn-miR-1822 mature miRNA
• Sequence: 40 - GAGCUGCCCUGGGAUAGACUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508