miRBase entry: cbn-mir-7597

Stem-loop cbn-mir-7597

Accession

MI0024794

Description

Caenorhabditis brenneri cbn-mir-7597 precursor miRNA

Sequence

gcuuuucucaaccuugguuguaaauaaucaugaaauguuuaUAACCAGGUUGAUAAUUGCAC
((..((.(((((((.(((((((((((.........)))))))))))))))))).))..))..

Structure

--  uu  c       u           auc 
  gc  uu ucaaccu gguuguaaaua   a
  ||  || ||||||| |||||||||||   u
  CG  AA AGUUGGA CCAAUauuugu   g
CA  UU  U       -           aaa

Annotation confidence Not enough data

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Genome context

Cbre_Contig34: 774891-774952 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from cbn-mir-7597

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7597

Accession	MIMAT0029653
Description	Caenorhabditis brenneri cbn-miR-7597 mature miRNA
Sequence	42 - UAACCAGGUUGAUAAUUGCAC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508