Stem-loop cbn-mir-7624

Accession

MI0024810

Description

Caenorhabditis brenneri cbn-mir-7624 precursor miRNA

Sequence

agaacacauuuuuuaucccaucuacccgcagaauaaaauggaguAGAGGUGAUUAAAUGUGUUCUGA
(((((((((((...(((((.((((((((..........))).))))))).))).)))))))))))..

Structure

--           uuu   -  a     -   caga 
  agaacacauuu   auc cc ucuac ccg    a
  |||||||||||   ||| || ||||| |||     
  UCUUGUGUAAA   UAG GG AGAug ggu    u
AG           --U   U  -     a   aaaa 

Annotation confidence Not enough data

Genome context

Cbre_Contig205: 241170-241236 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-7624

Mature cbn-miR-7624

• Accession: MIMAT0029666
• Description: Caenorhabditis brenneri cbn-miR-7624 mature miRNA
• Sequence: 45 - AGAGGUGAUUAAAUGUGUUCUGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508