miRBase entry: cbn-mir-64e

Stem-loop cbn-mir-64e


Accession
MI0024854
Description
Caenorhabditis brenneri cbn-mir-64e precursor miRNA
Gene family
MIPF0000295; mir-64


Sequence

UAUGACACAUAUGCAUAGUUGGAucauucaagaccaucgaauccaaccaugauauguggaauagu
(((..(((((((.(((.((((((((.............).))))))).))))))))))..)))..

Structure
--   GA       G   A       - auuca 
  UAU  CACAUAU CAU GUUGGAu c     a
  |||  ||||||| ||| ||||||| |     g
  aua  guguaua gua caaccua g     a
ug   ag       -   c       a cuacc 


Annotation confidence Not enough data
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Genome context
Cbre_Contig274: 38928-38992 [-]
Clustered miRNAs
13 other miRNAs are < 10 kb from cbn-mir-64e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-64e

Accession MIMAT0029704
Description Caenorhabditis brenneri cbn-miR-64e mature miRNA
Sequence 1 - UAUGACACAUAUGCAUAGUUGGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508