Stem-loop cbn-mir-64k-2

Accession

MI0024862

Description

Caenorhabditis brenneri cbn-mir-64k-2 precursor miRNA

Gene family

MIPF0000295; mir-64

Sequence

UAUGACACUGGGACGGUUAGGAaccgaguguuuccuaaacgcagcagugucguaaa
((((((((((...((..((((((........))))))..))...))))))))))..

Structure

--          GGA  GU      ccg 
  UAUGACACUG   CG  UAGGAa   a
  ||||||||||   ||  ||||||    
  augcugugac   gc  auccuu   g
aa          gac  aa      ugu 

Annotation confidence Not enough data

Genome context

Cbre_Contig230: 85037-85092 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cbn-mir-64k-2

Mature cbn-miR-64k

• Accession: MIMAT0029708
• Description: Caenorhabditis brenneri cbn-miR-64k mature miRNA
• Sequence: 1 - UAUGACACUGGGACGGUUAGGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508