Stem-loop cbn-mir-64a-4

Accession

MI0024867

Description

Caenorhabditis brenneri cbn-mir-64a-4 precursor miRNA

Gene family

MIPF0000295; mir-64

Sequence

UAUGACACUUAAGCAUAGGUGGAccaucgaagaucauaggcuccagcuaugauaaguggaauagu
(((..((((((..(((((.((((((.............)).)))).))))).))))))..)))..

Structure

--   GA      AG     G    -  aucga 
  UAU  CACUUA  CAUAG UGGA cc     a
  |||  ||||||  ||||| |||| ||     g
  aua  gugaau  guauc accu gg     a
ug   ag      -a     g    c  auacu 

Annotation confidence Not enough data

Genome context

Cbre_Contig230: 84290-84354 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cbn-mir-64a-4

Mature cbn-miR-64a

• Accession: MIMAT0029702
• Description: Caenorhabditis brenneri cbn-miR-64a mature miRNA
• Sequence: 1 - UAUGACACUUAAGCAUAGGUGGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508