miRBase entry: cbn-mir-1-1

Stem-loop cbn-mir-1-1


Accession
MI0024872
Description
Caenorhabditis brenneri cbn-mir-1-1 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

caugcuucuucuacaugcccauacuauaucguaaauggauaUGGAAUGUAAAGAAGUAUGUA
((((((((((.(((((..(((((((((.......)))).))))).)))))))))))))))..

Structure
--          c     gc     -    au 
  caugcuucuu uacau  ccaua cuau  c
  |||||||||| |||||  ||||| ||||  g
  GUAUGAAGAA AUGUA  GGUau ggua  u
AU          -     -A     a    aa 


Annotation confidence Not enough data
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Genome context
Cbre_Contig112: 224095-224156 [+]

Database links

Mature cbn-miR-1

Accession MIMAT0029710
Description Caenorhabditis brenneri cbn-miR-1 mature miRNA
Sequence 42 - UGGAAUGUAAAGAAGUAUGUA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508