miRBase entry: cbn-mir-44-2

Stem-loop cbn-mir-44-2


Accession
MI0024875
Description
Caenorhabditis brenneri cbn-mir-44-2 precursor miRNA
Gene family
MIPF0000132; mir-44


Sequence

cuggaugugcucguuagucauagacgauacacagagaacggucauaUGACUAGAGACACAUUCAGCU
(((((((((.((.((((((((((((...............))).))))))))).)))))))))))..

Structure
--         c  g         -   gauaca 
  cuggaugug uc uuagucaua gac      c
  ||||||||| || ||||||||| |||      a
  GACUUACAC AG GAUCAGUau cug      g
UC         -  A         a   gcaaga 


Annotation confidence Not enough data
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Genome context
Cbre_Contig144: 117703-117769 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cbn-mir-44-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-44

Accession MIMAT0029711
Description Caenorhabditis brenneri cbn-miR-44 mature miRNA
Sequence 47 - UGACUAGAGACACAUUCAGCU - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508