miRBase entry: cbn-mir-73a

Stem-loop cbn-mir-73a


Accession
MI0024881
Description
Caenorhabditis brenneri cbn-mir-73a precursor miRNA
Gene family
MIPF0000276; mir-73


Sequence

ugagcuuccacaucagaccacagcuauucacaaaaaaaaugcUGGCAAGAUGUAGGCAGUUCAGU
((((((.(((((((......((((................))))....))))).)).))))))..

Structure
--      u  -     agacca    uauucac 
  ugagcu cc acauc      cagc       a
  |||||| || |||||      ||||        
  ACUUGA GG UGUAG      GUcg       a
UG      C  A     --AACG    uaaaaaa 


Annotation confidence Not enough data
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Genome context
Cbre_Contig0: 1030713-1030777 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cbn-mir-73a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-73a

Accession MIMAT0029715
Description Caenorhabditis brenneri cbn-miR-73a mature miRNA
Sequence 43 - UGGCAAGAUGUAGGCAGUUCAGU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508