miRBase entry: cbn-mir-74a

Stem-loop cbn-mir-74a

Accession

MI0024884

Description

Caenorhabditis brenneri cbn-mir-74a precursor miRNA

Gene family

MIPF0000275; mir-74

Sequence

ugggcuuccauuaucuuucccagcagguucacgaacguaugcUGGCAAGAAAUGGCAGUCCACA
((((((.(((((.((((..((((((.(((....)))...)))))).))))))))).))))))..

Structure

--      u     a    uc      --g   c 
  ugggcu ccauu ucuu  ccagca   guu a
  |||||| ||||| ||||  ||||||   |||  
  ACCUGA GGUAA AGAA  GGUcgu   caa c
AC      C     -    -C      aug   g

Annotation confidence Not enough data

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Genome context

Cbre_Contig0: 1030439-1030502 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cbn-mir-74a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-74a

Accession	MIMAT0029718
Description	Caenorhabditis brenneri cbn-miR-74a mature miRNA
Sequence	43 - UGGCAAGAAAUGGCAGUCCACA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508