Stem-loop cbn-mir-50

Accession

MI0024904

Description

Caenorhabditis brenneri cbn-mir-50 precursor miRNA

Gene family

MIPF0000266; mir-50

Sequence

UGAUAUGUCUGGUAUUCUUGGGUUCauuccuuacucugaaccaguuuauuagacguaucgac
((((((((((((((..((..((((((..........))))))))..))))))))))))))..

Structure

--              UU  UG      uucc 
  UGAUAUGUCUGGUA  CU  GGUUCa    u
  ||||||||||||||  ||  ||||||     
  gcuaugcagauuau  ga  ccaagu    u
ca              uu  --      cuca 

Annotation confidence Not enough data

Genome context

Cbre_Contig18: 881172-881233 [-]

Mature cbn-miR-50

• Accession: MIMAT0029731
• Description: Caenorhabditis brenneri cbn-miR-50 mature miRNA
• Sequence: 1 - UGAUAUGUCUGGUAUUCUUGGGUUC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508