miRBase entry: cbn-mir-251b-1

Stem-loop cbn-mir-251b-1


Accession
MI0024917
Description
Caenorhabditis brenneri cbn-mir-251b-1 precursor miRNA
Gene family
MIPF0000284; mir-251


Sequence

AUAAGUAGUAGUGCCGCAGGUAAccgauuucaaugguuuaccuacugccuccugcuuagaa
.(((((((.((.((.(.(((((((((.......))).)))))).).)))).)))))))...

Structure
--A       U  U  C C      -   au 
   UAAGUAG AG GC G AGGUAA ccg  u
   ||||||| || || | |||||| |||  u
   auucguc uc cg c uccauu ggu  c
aag       c  -  u a      u   aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Cbre_Contig28: 301990-302050 [+]

Database links

Mature cbn-miR-251b

Accession MIMAT0031056
Description Caenorhabditis brenneri cbn-miR-251b mature miRNA
Sequence 1 - AUAAGUAGUAGUGCCGCAGGUAA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508