Stem-loop cbn-mir-79-1

Accession

MI0024927

Description

Caenorhabditis brenneri cbn-mir-79-1 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

cuuuggugauucaguuuuaaugauugacgauucaacguuuucuucAUAAAGCUAGGUUACCAAAGCU
(((((((((((.(((((((.(((..((((......))))....)))))))))).)))))))))))..

Structure

--           c       a   --uu    au 
  cuuuggugauu aguuuua uga    gacg  u
  ||||||||||| ||||||| |||    ||||   
  GAAACCAUUGG UCGAAAU Acu    uugc  c
UC           A       -   ucuu    aa 

Annotation confidence Not enough data

Genome context

Cbre_Contig15: 169202-169268 [-]

Mature cbn-miR-79

• Accession: MIMAT0029748
• Description: Caenorhabditis brenneri cbn-miR-79 mature miRNA
• Sequence: 46 - AUAAAGCUAGGUUACCAAAGCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508