miRBase entry: cbn-mir-7620b

Stem-loop cbn-mir-7620b

Accession

MI0024942

Description

Caenorhabditis brenneri cbn-mir-7620b precursor miRNA

Sequence

UAUUGCACAAAUUGUGUUCAUCUauuaagguugaaauaagaugaauggauucgugcaauaau
((((((((.((((..(((((((((((........))).)))))))).)))).))))))))..

Structure

--        A    GU        -   aag 
  UAUUGCAC AAUU  GUUCAUCU auu   g
  |||||||| ||||  |||||||| |||    
  auaacgug uuag  uaaguaga uaa   u
ua        c    -g        a   agu

Annotation confidence Not enough data

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Genome context

Cbre_Contig81: 7825-7886 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-7620b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7620b

Accession	MIMAT0029758
Description	Caenorhabditis brenneri cbn-miR-7620b mature miRNA
Sequence	1 - UAUUGCACAAAUUGUGUUCAUCU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508