Stem-loop cbn-mir-57-2

Accession

MI0024964

Description

Caenorhabditis brenneri cbn-mir-57-2 precursor miRNA

Gene family

MIPF0000271; mir-57

Sequence

UACCCUGUAGAUAGAGCUGUGUGUuuggaauauaccguacacaagcuagacuacaaggugaa
((((.(((((.(..((((.(((((.(((......))).)))))))))..)))))).))))..

Structure

--    C     A AG    G     u   aa 
  UACC UGUAG U  AGCU UGUGU ugg  u
  |||| ||||| |  |||| ||||| |||   
  gugg acauc a  ucga acaca gcc  a
aa    a     - ga    -     u   au 

Annotation confidence Not enough data

Genome context

Cbre_Contig239: 80665-80726 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-57-2

Mature cbn-miR-57

• Accession: MIMAT0029773
• Description: Caenorhabditis brenneri cbn-miR-57 mature miRNA
• Sequence: 1 - UACCCUGUAGAUAGAGCUGUGUGU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508