miRBase entry: cbn-mir-70

Stem-loop cbn-mir-70


Accession
MI0024968
Description
Caenorhabditis brenneri cbn-mir-70 precursor miRNA


Sequence

ugaaccaccacugacgaaucacauugaaacuaaagagaugUAAUACGUCAUUUGGUGUUUCCG
.(((.(((((.(((((.((.(((((...........))))).)).)))))..))))).)))..

Structure
-u   c     -c     a  c     gaaa 
  gaa cacca  ugacg au acauu    c
  ||| |||||  ||||| || |||||    u
  CUU GUGGU  ACUGC UA Uguag    a
GC   U     UU     A  A     agaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Cbre_Contig2104: 8307-8369 [-]

Database links

Mature cbn-miR-70

Accession MIMAT0029776
Description Caenorhabditis brenneri cbn-miR-70 mature miRNA
Sequence 41 - UAAUACGUCAUUUGGUGUUUCCG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508