miRBase entry: mmu-mir-6546

Stem-loop mmu-mir-6546


Accession
MI0024983
Symbol
MGI: Mir6546
Description
Mus musculus mmu-mir-6546 precursor miRNA


Sequence

868 reads, 31 reads per million, 56 experiments
AGGCGCCUCUGAGCUUGUGCUUGUcgccaggcugcgcuagcGAGCGAAGCCCAAGCGCCAGA
.(((((...((.((((.((((((((((......)))...))))))))))).)).)))))...

Structure
--A     CUC  A    G       ---   ca 
   GGCGC   UG GCUU UGCUUGU   cgc  g
   |||||   || |||| |||||||   |||   
   CCGCG   AC CGAA GCGAGcg   gcg  g
AGA     --A  C    -       auc   uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 171064591-171064652 [-]

Database links

Mature mmu-miR-6546-5p

Accession MIMAT0029792
Description Mus musculus mmu-miR-6546-5p mature miRNA
Sequence 1 - AGGCGCCUCUGAGCUUGUGCUUGU - 24
Evidence experimental
RNAseq [1]

Mature mmu-miR-6546-3p

Accession MIMAT0029793
Description Mus musculus mmu-miR-6546-3p mature miRNA
Sequence 42 - GAGCGAAGCCCAAGCGCCAGA - 62
Evidence experimental
RNAseq [1]

References

  1. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351