Stem-loop cbr-mir-35g-3

Accession

MI0025051

Description

Caenorhabditis briggsae cbr-mir-35g-3 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

cgcugguuuuuuuccgcggugauauuccaaaaaaagguuaUCACCGGGUAAAAACUGGUAGA
.((((((((((..((.((((((((..((.......)).)))))))))).))))))))))...

Structure

--c          uu  g        uu  aa 
   gcugguuuuu  cc cggugaua  cc  a
   ||||||||||  || ||||||||  ||  a
   UGGUCAAAAA  GG GCCACUau  gg  a
AGA          -U  -        -u  aa 

Annotation confidence Not enough data

Genome context

chrX: 15374070-15374131 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35g-3

Mature cbr-miR-35g

• Accession: MIMAT0029919
• Description: Caenorhabditis briggsae cbr-miR-35g mature miRNA
• Sequence: 41 - UCACCGGGUAAAAACUGGUAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508