miRBase entry: crm-mir-36

Stem-loop crm-mir-36


Accession
MI0025053
Description
Caenorhabditis remanei crm-mir-36 precursor miRNA
Gene family
MIPF0000096; mir-36


Sequence

cgccaauucuuaccgcgguaauagaacugcauaguuucuaUCACCGGGUGAAAAUUCGGCUCG
.(((((((.(((((.((((.((((((((....)).)))))).))))))))).)))).)))...

Structure
--c   -    c     g    a      -  g 
   gcc aauu uuacc cggu auagaa cu c
   ||| |||| ||||| |||| |||||| ||  
   CGG UUAA AGUGG GCCA Uaucuu ga a
GCU   C    A     -    C      u  u 


Annotation confidence Not enough data
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Genome context
Crem_Contig93: 221244-221306 [-]
Clustered miRNAs
15 other miRNAs are < 10 kb from crm-mir-36
Name Accession Chromosome Start End Strand Confidence




Database links

Mature crm-miR-36

Accession MIMAT0029921
Description Caenorhabditis remanei crm-miR-36 mature miRNA
Sequence 41 - UCACCGGGUGAAAAUUCGGCUCG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508