Stem-loop cbn-mir-35b-2

Accession

MI0025069

Description

Caenorhabditis brenneri cbn-mir-35b-2 precursor miRNA

Gene family

MIPF0001648; mir-35_2

Sequence

agcugauuucucuacaggugauaauuccaucgaguguuuaUCACCGGGAGUAAAUCUGCUCU
(((.(((((((((...(((((((((((....))))...))))))).)))).))))).)))..

Structure

--   u     -    aca       ---    c 
  agc gauuu cucu   ggugaua   auuc a
  ||| ||||| ||||   |||||||   ||||  
  UCG CUAAA GAGG   CCACUau   ugag u
UC   U     U    --G       uug    c 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 783694-783755 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35b-2

Mature cbn-miR-35b

• Accession: MIMAT0029929
• Description: Caenorhabditis brenneri cbn-miR-35b mature miRNA
• Sequence: 41 - UCACCGGGAGUAAAUCUGCUCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508