Stem-loop cbn-mir-35b-4

Accession

MI0025076

Description

Caenorhabditis brenneri cbn-mir-35b-4 precursor miRNA

Gene family

MIPF0001648; mir-35_2

Sequence

agcugauuucucuacuggugauaaguccgaucauaguguuuaUCACCGGGAGUAAAUCUGCUCU
(((.((((((((..(((((((((((.((.......).))))))))))))))).))))).)))..

Structure

--   u     -   ua           u - ga 
  agc gauuu cuc  cuggugauaag c c  u
  ||| ||||| |||  ||||||||||| | |  c
  UCG CUAAA GAG  GGCCACUauuu g g  a
UC   U     U   --           - u au 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 785254-785317 [-]

Clustered miRNAs

18 other miRNAs are < 10 kb from cbn-mir-35b-4

Mature cbn-miR-35b

• Accession: MIMAT0029929
• Description: Caenorhabditis brenneri cbn-miR-35b mature miRNA
• Sequence: 43 - UCACCGGGAGUAAAUCUGCUCU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508