miRBase entry: pmi-mir-124

Stem-loop pmi-mir-124


Accession
MI0025105
Description
Patiria miniata pmi-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
1 open access papers mention pmi-mir-124
(1 sentences)

Sequence

aauauuuuguauccaguucuuaguguucacugcgauccuugauuuacacacaacgugggcaauUAAGGCACGCGGUGAAUGCCAAgagucuggaauccauacacaucg
.......((((((((((((((.((((((((((((..((((((((..(((.....)))...))))))))..)))))))))))).))))).))))).....)))).....

Structure
aauauuu    -----     -     a            au        -ua   a 
       ugua     uccag uucuu guguucacugcg  ccuugauu   cac c
       ||||     ||||| ||||| ||||||||||||  ||||||||   ||| a
       acau     agguc gagAA CGUAAGUGGCGC  GGAAUuaa   gug a
--gcuac    accua     u     C            AC        cgg   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-124-3p

Accession MIMAT0032157
Description Patiria miniata pmi-miR-124-3p mature miRNA
Sequence 64 - UAAGGCACGCGGUGAAUGCCAA - 85
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374