miRBase entry: pmi-mir-125

Stem-loop pmi-mir-125


Accession
MI0025106
Description
Patiria miniata pmi-mir-125 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

cgucaaaauaugcccaguucucagUCCCUGAGACCCUAACUUGUGAuugagugaacagaaccacauguuagugucucaggaauugggcgcugcggugagca
...........(((((((.((((((.((((((((.(((((.((((.(((......)))...)))).))))).)))))))).)))))).)))).))).....

Structure
cgucaaaauau   -    u      C        C     U    --A   ag 
           gcc cagu cucagU CCUGAGAC CUAAC UGUG   uug  u
           ||| |||| |||||| |||||||| ||||| ||||   |||   
           ugg gucg ggguua ggacucug gauug acac   gac  g
------acgag   c    c      a        u     u    caa   aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-125-5p

Accession MIMAT0032158
Description Patiria miniata pmi-miR-125-5p mature miRNA
Sequence 25 - UCCCUGAGACCCUAACUUGUGA - 46
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374