miRBase entry: pmi-mir-2001

Stem-loop pmi-mir-2001


Accession
MI0025122
Description
Patiria miniata pmi-mir-2001 precursor miRNA

Literature search
1 open access papers mention pmi-mir-2001
(1 sentences)

Sequence

auugucaguuucguuuAUGUGACCGUUACAAUGGGCAUguuauauccuaaaaaugcccgcugcaacguucacaacaacgggcaugaccag
...((((..((((((..(((((.((((.((.(((((((..............))))))).)).)))).)))))..))))))..))))...

Structure
auu    gu      uA     C    A  A       guuaua 
   guca  uucguu  UGUGA CGUU CA UGGGCAU      u
   ||||  ||||||  ||||| |||| || |||||||       
   cagu  gggcaa  acacu gcaa gu gcccgua      c
gac    ac      ca     u    c  c       aaaauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-2001-5p

Accession MIMAT0032175
Description Patiria miniata pmi-miR-2001-5p mature miRNA
Sequence 17 - AUGUGACCGUUACAAUGGGCAU - 38
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374