miRBase entry: pmi-mir-2007

Stem-loop pmi-mir-2007


Accession
MI0025127
Description
Patiria miniata pmi-mir-2007 precursor miRNA

Literature search
1 open access papers mention pmi-mir-2007
(1 sentences)

Sequence

cgccauggcagcgcugcugUAUUUCAGGCGGUAUACUGGUAAcagcuuauaugcagaguuuaccaguuacuucuuggaauauagggacgcuugucuuaacg
......(((((((.(.((((((((((((.((((.((((((((..((((.......)))))))))))))))).)))))))))))).).))).))))......

Structure
cgccau    -   c g            C    U        ca    au 
      ggca gcg u cugUAUUUCAGG GGUA ACUGGUAA  gcuu  a
      |||| ||| | |||||||||||| |||| ||||||||  ||||  u
      cugu cgc g gauauaagguuc ucau ugaccauu  ugag  g
gcaauu    u   a g            u    -        --    ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pmi-miR-2007-5p

Accession MIMAT0032181
Description Patiria miniata pmi-miR-2007-5p mature miRNA
Sequence 20 - UAUUUCAGGCGGUAUACUGGUAA - 42
Evidence not_experimental

References

  1. PubMed ID: 23703796
    MicroRNAs support the monophyly of enteropneust hemichordates
    "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
    "J Exp Zool B Mol Dev Evol (2013) 320:368-374