Stem-loop lva-mir-9

Accession

MI0025137

Description

Lytechinus variegatus lva-mir-9 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

auacugacucugcuuuugUCUUUGGUUAUCUAGCUGUAUGagugaagucaaugcaucauaaagcuagguuaccaaagauaagugccuguugucacau
....((((.(.((.((((((((((((.((((((((.(((((((.........)).))))).)))))))).)))))))))))).))..)..))))...

Structure

auac    -u -u  u            U        G     -  gaa 
    ugac  c  gc uuugUCUUUGGU AUCUAGCU UAUGa gu   g
    ||||  |  || |||||||||||| |||||||| ||||| ||   u
    acug  g  cg gaauagaaacca uggaucga auacu cg   c
-uac    uu uc  u            u        a     a  uaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-9-5p

• Accession: MIMAT0032192
• Description: Lytechinus variegatus lva-miR-9-5p mature miRNA
• Sequence: 19 - UCUUUGGUUAUCUAGCUGUAUG - 40
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374