Stem-loop lva-mir-22

Accession

MI0025139

Description

Lytechinus variegatus lva-mir-22 precursor miRNA

Gene family

MIPF0000053; mir-22

Sequence

acacuucaucugcaugcugauauguuaauguugagacucaaauagcuauCAGCUGCCCGGUGAAGUGUAUAgaaac
((((((((((.(((.(((((((.((((...((((...)))).))))))))))))))..))))))))))........

Structure

--------          -u   u       u    aug    g 
        acacuucauc  gca gcugaua guua   uuga  
        ||||||||||  ||| ||||||| ||||   |||| a
        UGUGAAGUGG  CGU CGACuau cgau   aacu  
caaagAUA          CC   -       -    --a    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-22-3p

• Accession: MIMAT0032194
• Description: Lytechinus variegatus lva-miR-22-3p mature miRNA
• Sequence: 50 - CAGCUGCCCGGUGAAGUGUAUA - 71
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374