Stem-loop lva-mir-31

Accession

MI0025142

Description

Lytechinus variegatus lva-mir-31 precursor miRNA

Gene family

MIPF0000064; mir-31

Sequence

uauaaaccaguggagaaaAGGCAAGAUGUUGGCAUAGCUgugugauuuaauacgaacccagcuguguccucauauugccauuuauucacgugguuauucg
....((((((((((.(((.(((((.(((..((((((((((.((............)).))))))))))..))).))))).))).))))).))))).....

Structure

-uaua     -     g   A     G   UU          u  gauuu 
     aacca gugga aaa GGCAA AUG  GGCAUAGCUg gu     a
     ||||| ||||| ||| ||||| |||  |||||||||| ||      
     uuggu cacuu uuu ccguu uac  cugugucgac ca     a
gcuua     g     a   a     a   uc          c  agcau 

Annotation confidence Not enough data

Genome context

Unknown

Mature lva-miR-31-5p

• Accession: MIMAT0032197
• Description: Lytechinus variegatus lva-miR-31-5p mature miRNA
• Sequence: 19 - AGGCAAGAUGUUGGCAUAGCU - 39
• Evidence: not_experimental

References

1. PubMed ID: 23703796
   MicroRNAs support the monophyly of enteropneust hemichordates
   "Peterson KJ, Su YH, Arnone MI, Swalla B, King BL"
   "J Exp Zool B Mol Dev Evol (2013) 320:368-374